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Systems Biology and Physiology Reports in 2021: a yearly report

Mikhail Panteleev1,2,3
Mikhail Panteleev
Mikhail Panteleev
MSU, Faculty of physics
Сorrespondence:[email protected]
1
Center For Theoretical Problems of Physico-Chemical Pharmacology RAS, 109029, Srednyaya Kalitnikovskaya 30, Moscow, Russia
2
Dmitriy Rogachev National Medical Research Center of Pediatric Hematology, Oncology Immunology Ministry of Healthcare of Russian Federation, 117997, Samory Machela 1, Moscow Russia
3
Lomonosov Moscow State University, Physics Faculty 119991, Leninskiye Gory 1-2, Moscow, Russia
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1.
Center For Theoretical Problems of Physico-Chemical Pharmacology RAS, 109029, Srednyaya Kalitnikovskaya 30, Moscow, Russia
2.
Dmitriy Rogachev National Medical Research Center of Pediatric Hematology, Oncology Immunology Ministry of Healthcare of Russian Federation, 117997, Samory Machela 1, Moscow Russia
3.
Lomonosov Moscow State University, Physics Faculty 119991, Leninskiye Gory 1-2, Moscow, Russia

Dear All,

I am happy to greet all readers, editors, reviewers, staff members and publishers of SBPR on the eve of year 2022. I thank all of you for your efforts in creating this journal and making it work despite all the challenges faced by a new independent journal in the age dominated by huge publishers, research societies and citation systems. Please accept my best wishes for the year 2022 in your professional and personal undertakings!

Where do we stand now, and what are our goals for 2022?

The scope and the style of the journal have become somewhat crystallized over this year. After a year of development, SBPReports boasts a highly professional and dedicated editorial board formed by experts in the systems biology field from Belarus, Canada, China, India, Russia, UK and USA. The three major sections of the edition are related to the three major levels of understanding of the biological systems: molecular

[
1,
A minimal mathematical model of neutrophil pseudopodium formation during chemotaxis

J. Korobkin, A. Garcia, A. Sveshnikova

Systems Biology and Physiology Reports. 2021, 1, 6-12

https://doi.org/10.52455/sbpr.01.202103012

Article | Google Scholar

2
STIM1-ORAI1 direct interaction cannot govern store-operated calcium entry (SOCE) in platelets

A. Garzon Dasgupta

Systems Biology and Physiology Reports. 2021, 1, 11-16

https://doi.org/10.52455/sbpr.01.202102012

Article | Google Scholar

]
, cellular
[
3,
On calcium fluorophore’s impact in platelet signaling studies

S. Galkina, F. Balabin

Systems Biology and Physiology Reports. 2021, 1, 10-17

https://doi.org/10.52455/sbpr.01.202104012

Article | Google Scholar

4
Presence of PI-rich vesicles is required for the PLC ζ activation according to mathematical modeling

A. Tabachnik

Systems Biology and Physiology Reports. 2021, 1, 17-22

https://doi.org/10.52455/sbpr.01.202102013

Article | Google Scholar

]
, and organism
[
5,
Immune thrombocytopenia: what can the systems biology and systems physiology offer?

O. An, A. Martyanov, M. Panteleev

Systems Biology and Physiology Reports. 2021, 1, 1-9

https://doi.org/10.52455/sbpr.01.202104011

Article | Google Scholar

6
A strong correlation exists between platelet consumption and platelet hyperactivation in COVID-19 patients. Pilot study of the patient cohort from CCH RAS Hospital (Troitsk).

M. Stepanyan, A. Martyanov, O. An, A. Boldova, S. Roumiantsev, A. Rumyantsev, M. Panteleev, F. Ataullakhanov, A. Sveshnikova

Systems Biology and Physiology Reports. 2021, 1, 1-10

https://doi.org/10.52455/sbpr.01.202102011

Article | Google Scholar

]
levels. The papers published in the four issues during this year include original articles
[
1,
A minimal mathematical model of neutrophil pseudopodium formation during chemotaxis

J. Korobkin, A. Garcia, A. Sveshnikova

Systems Biology and Physiology Reports. 2021, 1, 6-12

https://doi.org/10.52455/sbpr.01.202103012

Article | Google Scholar

2,
STIM1-ORAI1 direct interaction cannot govern store-operated calcium entry (SOCE) in platelets

A. Garzon Dasgupta

Systems Biology and Physiology Reports. 2021, 1, 11-16

https://doi.org/10.52455/sbpr.01.202102012

Article | Google Scholar

4,
Presence of PI-rich vesicles is required for the PLC ζ activation according to mathematical modeling

A. Tabachnik

Systems Biology and Physiology Reports. 2021, 1, 17-22

https://doi.org/10.52455/sbpr.01.202102013

Article | Google Scholar

6
A strong correlation exists between platelet consumption and platelet hyperactivation in COVID-19 patients. Pilot study of the patient cohort from CCH RAS Hospital (Troitsk).

M. Stepanyan, A. Martyanov, O. An, A. Boldova, S. Roumiantsev, A. Rumyantsev, M. Panteleev, F. Ataullakhanov, A. Sveshnikova

Systems Biology and Physiology Reports. 2021, 1, 1-10

https://doi.org/10.52455/sbpr.01.202102011

Article | Google Scholar

]
, reviews
[
5,
Immune thrombocytopenia: what can the systems biology and systems physiology offer?

O. An, A. Martyanov, M. Panteleev

Systems Biology and Physiology Reports. 2021, 1, 1-9

https://doi.org/10.52455/sbpr.01.202104011

Article | Google Scholar

7,
Platelet functional responses and signalling: the molecular relationship. Part 1: responses.

A. Sveshnikova, M. Stepanyan, M. Panteleev

Systems Biology and Physiology Reports. 2021, 1, 20-28

https://doi.org/10.52455/sbpr.01.202101014

Article | Google Scholar

8,
In vitro models of thrombosis and hemostasis

A. Asadov, I. Chudinov, D. Nechipurenko

Systems Biology and Physiology Reports. 2021, 1, 23-32

https://doi.org/10.52455/sbpr.01.202102014

Article | Google Scholar

9
Overview of the neutralizing antibody and memory B cell response kinetics in SARS-CoV-2 convalescent and/or mRNA vaccinated individuals.

I. Grigorova

Systems Biology and Physiology Reports. 2021, 1, 1-5

https://doi.org/10.52455/sbpr.01.202103011

Article | Google Scholar

]
, and methodological studies
[
10,
Patch-clamp technique for studying ion channels in activated platelets

A. Kokhan, S. Zdanevich, I. Prokofev, I. Gorudko, E. Shamova

System Biology and Physiology Reports. 2021, 1, 3-11

https://doi.org/10.52455/sbpr.01.202101012

Article | Google Scholar

11
Avoiding common problems with statistical analysis of biological experiments using a simple nested data simulator

V. Alexandrova, M. Anisimov, I. Eltsov, A. Kilina, I. Lopanskaia, L. Makarova, M. Vovchenko, N. Gudimchuk

System Biology and Physiology Reports. 2021, 1, 12-19

https://doi.org/10.52455/sbpr.01.202101013

Article | Google Scholar

]
. In addition, two large abstract collections Systems Biology and Systems Physiology Congress 2021 and International Congress devoted to the Memory of the Founders of Biophysics Department of Physics Faculty of Lomonosov Moscow State University – professor L.A. Blumenfeld and professor S.E. Shnoll have been published during this year as proceedings of two important international conferences in our field; the journal also served as a platform for the conference planning. 

The following goals could be indicated for 2022.

1. We need to work on increasing the diversity of the subjects (which are presently dominated by immunology and hematology) and of the geography of the submissions.

2. The first essential steps towards inclusion in the citation systems (first of all, Russian Science Citation Index and Directory of Open Access Journals) need to be undertaken.

3. Finally, and most importantly, SBPReports will continue to publish novel and significant research to contribute to the knowledge of the complex biological systems.

Thank you for being with us this year, there is so much more to come.
 
On behalf of the SBPReports editorial board,
Mikhail Panteleev

References of this article:

  1. A minimal mathematical model of neutrophil pseudopodium formation during chemotaxis

    J. Korobkin, A. Garcia, A. Sveshnikova

    Systems Biology and Physiology Reports. 2021, 1, 6-12

    https://doi.org/10.52455/sbpr.01.202103012

    Article|Google Scholar

  2. STIM1-ORAI1 direct interaction cannot govern store-operated calcium entry (SOCE) in platelets

    A. Garzon Dasgupta

    Systems Biology and Physiology Reports. 2021, 1, 11-16

    https://doi.org/10.52455/sbpr.01.202102012

    Article|Google Scholar

  3. On calcium fluorophore’s impact in platelet signaling studies

    S. Galkina, F. Balabin

    Systems Biology and Physiology Reports. 2021, 1, 10-17

    https://doi.org/10.52455/sbpr.01.202104012

    Article|Google Scholar

  4. Presence of PI-rich vesicles is required for the PLC ζ activation according to mathematical modeling

    A. Tabachnik

    Systems Biology and Physiology Reports. 2021, 1, 17-22

    https://doi.org/10.52455/sbpr.01.202102013

    Article|Google Scholar

  5. Immune thrombocytopenia: what can the systems biology and systems physiology offer?

    O. An, A. Martyanov, M. Panteleev

    Systems Biology and Physiology Reports. 2021, 1, 1-9

    https://doi.org/10.52455/sbpr.01.202104011

    Article|Google Scholar

  6. A strong correlation exists between platelet consumption and platelet hyperactivation in COVID-19 patients. Pilot study of the patient cohort from CCH RAS Hospital (Troitsk).

    M. Stepanyan, A. Martyanov, O. An, A. Boldova, S. Roumiantsev, A. Rumyantsev, M. Panteleev, F. Ataullakhanov, A. Sveshnikova

    Systems Biology and Physiology Reports. 2021, 1, 1-10

    https://doi.org/10.52455/sbpr.01.202102011

    Article|Google Scholar

  7. Platelet functional responses and signalling: the molecular relationship. Part 1: responses.

    A. Sveshnikova, M. Stepanyan, M. Panteleev

    Systems Biology and Physiology Reports. 2021, 1, 20-28

    https://doi.org/10.52455/sbpr.01.202101014

    Article|Google Scholar

  8. In vitro models of thrombosis and hemostasis

    A. Asadov, I. Chudinov, D. Nechipurenko

    Systems Biology and Physiology Reports. 2021, 1, 23-32

    https://doi.org/10.52455/sbpr.01.202102014

    Article|Google Scholar

  9. Overview of the neutralizing antibody and memory B cell response kinetics in SARS-CoV-2 convalescent and/or mRNA vaccinated individuals.

    I. Grigorova

    Systems Biology and Physiology Reports. 2021, 1, 1-5

    https://doi.org/10.52455/sbpr.01.202103011

    Article|Google Scholar

  10. Patch-clamp technique for studying ion channels in activated platelets

    A. Kokhan, S. Zdanevich, I. Prokofev, I. Gorudko, E. Shamova

    System Biology and Physiology Reports. 2021, 1, 3-11

    https://doi.org/10.52455/sbpr.01.202101012

    Article|Google Scholar

  11. Avoiding common problems with statistical analysis of biological experiments using a simple nested data simulator

    V. Alexandrova, M. Anisimov, I. Eltsov, A. Kilina, I. Lopanskaia, L. Makarova, M. Vovchenko, N. Gudimchuk

    System Biology and Physiology Reports. 2021, 1, 12-19

    https://doi.org/10.52455/sbpr.01.202101013

    Article|Google Scholar

I. Where do we stand now, and what are our goals for 2022?
II. The following goals could be indicated for 2022.